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Niantic River Watershed  
Protection Plan 
~~~ 
Guided Summary 
 
 
 
March 2009 
 
 
 
 
 
 
 
 
 
 
 
The Guided Summary of the Niantic River Watershed Protection Plan was prepared by 
the Eastern Connecticut Conservation District and  funded in part by the CT DEP 
through the US EPA Nonpoint Source grant under section 319 of the Clean Water Act. 
 
Printed on Recycled Paper 

 
2
 
 
 
Niantic River scallops were abundant during the days of the 
Nehantic Indians, for the shoreline property soil is well-sprinkled with 
their shells.  Again in the 1930’s the scallops flourished.  This was the time 
of “The Great Depression” and many of the jobless earned a scant living 
scalloping.  Great trucks from Boston, Providence and New York backed 
up to the several town landings especially at the foot of Grand St. – to buy 
directly from the individual scallopers.  Those of us who enjoyed the 
bounty of the scallops still remember the tender sweetness of those tiny 
morsels.  We remember as well the chapped hands and the hands encased 
in band-aids from the horrendous task of opening those razor-sharp 
shells.  We all learned at an early age that pleasure usually comes with a 
price!  
 
 
-Olive Chenaldi, (Town Historian) 
 
Excerpt from “Stories of East Lyme” 
Reprinted with permission by the East Lyme Library 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

 
3
Did You Know? 
Niantic River ~ Quick Facts 
 
Did you know? 
 
• The Niantic River does not currently meet state water quality standards 
because of observed degradation of aquatic life and shellfish harvesting.  
• Nitrogen and bacteria are the two greatest water quality concerns for the 
Niantic River.  
• Rain carries bacteria into the river where it is filtered by shellfish rendering 
them unsafe for consumption.  The shellfish beds in the River are closed after 
every rainfall event of at least one inch. 
• Excess nitrogen entering the river enriches the brackish Niantic River water, 
like fertilizer on a lawn, increasing algal and plant growth 
• Polluted runoff accounts for approximately half (50%) of the nitrogen inputs 
into the Niantic River. 
• Beginning in the 1980s, there was a sharp decline in eelgrass and in 
subsequent years eelgrass populations have shown annual variation.  
Scallops and winter flounder, which rely on eelgrass as nursery habitat, are 
practically missing from the Niantic River. 
• New species like green crabs and grubby, which are more tolerant of polluted 
waters, appear to be on the rise in the river. 
• The Niantic River Watershed covers 31.3 square miles, or approximately 
20,000 acres, and includes areas from the four towns of Salem, East Lyme, 
Waterford, and Montville.  Watershed management boils down to land use 
management and will depend on participation of all four communities. 
• There is a direct relationship between increased impervious surfaces in a 
watershed and degradation of water quality.   
• Oswegatchie Hills is one of the last large stretches of undeveloped waterfront 
land in Connecticut. 
 
 
 
 
 
 
 
 
 
 
 

 
4
Table of Contents 
 
Section 
 
 
 
 
 
 
 
 
        Page 
 
Acknowledgements                           
 
 
 
 
 
5 
 
Introduction  
 
 
 
 
 
 
 
 
6 
 
 
 
 
 
 
Executive Summary   
 
 
 
 
 
 
 
7 
 
Full Watershed Management Plan  
 
 
 
 
 
7 
 
Purpose of the “Guided Summary”  
 
 
 
 
 
7 
 
Description of the Niantic River Watershed 
 
 
 
 
8 
 
Water Quality Issues in the Watershed 
 
 
 
 
 
10 
 
Land-Use and Water Quality 
 
 
 
 
 
 
14 
 
 
 
 
 
 
 
 
What Needs to be Done? 
 
 
 
 
 
 
 
21 
 
Key Watershed Findings 
 
 
 
 
 
 
 
22 
 
Watershed Stakeholders—Where Do You Fit In? 
 
 
 
22 
 
Goals and Objectives  
 
 
 
 
 
 
 
25 
 
Key Recommendations 
 
 
 
 
 
 
 
26 
 
Where are We Now? 
 
 
 
 
 
 
 
32 
 
References 
 
 
 
 
 
 
 
 
 
33 
  
 
 
 
 
 
 
 
 
 
 

 
5
Acknowledgements 
 
This document would not be possible without the dedication and contributions from 
the following individuals: 
 
Chief Executive Officers: We would like to express our appreciation to Paul Formica, East Lyme 
First Selectman, Joseph Jaskiewicz, Mayor of Montville, Bob Ross, Salem First Selectman, and Dan 
Steward, Waterford First Selectman for their time and contributions. 
 
Original Consulting Team and Steering Committee: The Niantic River Watershed – Plan 
Refinement Group would like to acknowledge the contributors of the full Niantic River Watershed 
Protection Plan, funded by the National Oceanic and Atmospheric Association (NOAA) of Ocean and 
Coastal Resource Management (OCRM).  These organizations and individuals include: 
 
Consulting Team:  Kleinschmidt Associates 
The Original Project Steering Committee: Marcia Balint, CTDEP OLISP, Colleen Bezanson, 
Town of Montville, Allison Branco, UCONN Avery Point, Marine Sciences Mary Ann Chinatti, 
Town of Salem, Maureen Fitzgerald, Town of Waterford John Gaucher, CTDEP OLISP, Fred 
Grimsey, Save the River, Save the Hills Mary-Beth Hart, CTDEP OLISP, Kristal Kallenberg, 
CTDEP OLISP, Dr. Jim Kremer, UCONN Avery Point, Marine Sciences, Don Landers, East 
Lyme Harbor Management/Shellfish Commission, John Mullaney, USGS, Meg Parulis, Town of 
East Lyme, Sally Snyder, Town of Salem, Paul Stacey, CTDEP Nonpoint Source Program 
Eric Thomas, CTDEP Watershed Management Program, Jamie Vaudrey, UCONN Avery Point, 
Marine Sciences and Tom Wagner, Town of Waterford 
 
 
Funding and DEP Support:  The Guided Summary of the Niantic River Watershed Protection Plan 
was funded in part by the CT DEP through the US EPA Nonpoint Source grant under section 319 of the 
Clean Water Act.  The following DEP individuals have provided invaluable support: Jessica Morgan, 
MaryAnn Nusom-Haverstock, Paul Stacey, Eric Thomas and Stan Zaremba 
 
The Niantic River Watershed – Plan Refinement Group: The  Guided Summary of the Niantic 
River Watershed Protection Plan was only possible through the vital suggestions and recommendations of 
the following individuals: Colleen Bezanson, Town of Montville, Mary Ann Chinatti, Town of Salem, 
Richard Dalkowski, Town of Salem, Maureen Fitzgerald, Town of Waterford,  Don Landers, East Lyme 
Harbor Management/Shellfish Commission, Creig Peterson, Town of East Lyme, Joel Stocker, UCONN, 
Eric Thomas, CTDEP Watershed Management Program, Pat Young, Watershed Coordinator, and George 
Ziegra, Town of Salem 
 
Review Comment Contributors: 
Joe Mingo, A. V. Polhemus, Montville Planning and Zoning, Christie Hayes, Mark Nickerson, Chairman, 
E. Lyme Zoning Commission, Doug Brush, Chairman, Montville Inland Wetland Commission, Salem 
Inland Wetland Commission, John Mullaney, USGS, Don Landers, Chairman, EL Harbor Management, 
Frank Morelii, Public Utilities Administrator, City of New London, Salem Planning and Zoning 
Commission Comments, Rich Muckle, Member of the Waterford Conservation Commission, Mary E. 
Becker, Bureau of Water Protection and Land Reuse, CT Department of Environmental Protection, Fred 
Grimsey, President, Save the River-Save the Hills, Inc. 
 
 
 
 

 
6
Introduction: 
 
The Guided Summary of the Niantic River Watershed Protection Plan was produced for 
the purpose of providing town officials, commission members, business owners, 
homeowners and the general public a shortened account of the highlights of the full plan.  
It has been organized in a format that describes the watershed management concerns then 
outlines the goals, objectives and recommendations.  Throughout the text, references to 
sections in the full plan are included, so that the reader may conduct further research into 
an area of interest.  To a great extent most of the wording, tables and maps are taken 
directly from the original plan, with editing, updates or clarifications included, as 
warranted. 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

 
7
Niantic River Watershed Protection Plan 
Guided Summary 
 
The Niantic River Watershed Protection Plan was produced for the communities and 
advised by a Steering Committee with the vision to improve water quality throughout 
the watershed, eliminate shellfish bed closures, support fish and wildlife habitat and 
provide safe and healthy recreational areas. 
 
Executive Summary  
 
This plan takes a watershed approach to addressing the problems of nonpoint source 
pollution associated with the Niantic River, rather than a site specific approach. It 
considers the hydrologic, or watershed, boundaries of the Niantic River to characterize 
pollution sources and to develop strategies to address them. Through this scope, the 
characteristics and land uses of the watershed were examined to better understand the 
current and potential risk of nonpoint source pollution. Based on these risk assessments, 
it can then be determined what measures should be taken to decrease nonpoint source 
pollution to protect the Niantic River and its tributaries. 
 
 
Full Watershed Management Plan 
 
The full version of the watershed management plan, entitled Niantic River Watershed 
Protection Plan, was completed in 2006.  This plan was completed under a consulting 
team, headed by Kleinschmidt Associates.  It offers detailed information on 
environmental issues specific to the Niantic River, a Vulnerability Analysis of key 
parcels within the watershed and strategies aimed at addressing identified water quality 
impairments.  Copies of the full plan were forwarded to each watershed town’s Public 
Library and Planning Department.  The plan may also be viewed on-line at the following 
link:  
 
http://www.ct.gov/dep/cwp/view.asp?a=2719&q=379296&depNav_GID=1654 
 
Purpose of the “Guided Summary” 
 
The Guided Summary of the Niantic River Watershed Management Plan was produced 
for the purpose of offering commission members and the general public a concise 
description of the water quality impairments affecting the watershed and to provide a 
focused directory of recommendations aimed at reducing those impairments.  With this 
condensed version as a tool, it is anticipated that stakeholders will have a better 
understanding of the relevant issues, be able to determine their role in the decision-
making process and take appropriate actions. 
 
 
 

 
8
Description of the Niantic River Watershed 
 
A watershed consists of all the land that drains to a waterbody, in this case, the Niantic 
River.  Local water features such as Fairy Lake, Horse Pond, Barnes Reservoir, Bogue 
Brook Reservoir, Lake Konomac, Darrow Pond, Latimer Brook, Oil Mill Brook, Stony 
Brook as well as the Niantic River itself, are all part of what is called the Niantic River 
Watershed, (Fig. I).  The watershed covers 31.3 square miles, or approximately 20,000 
acres and includes areas from the four towns of East Lyme, Waterford, Salem and 
Montville. 
 
The Niantic River is an estuary.  Fresh water drains from a small coastal watershed to a 
tidal embayment where fresh water mixes with the salt water of Long Island Sound. 
Many people relate to the Niantic River as a body of saltwater that provides access to the 
Sound and to a rich variety of marine resources. Others make connections to local 
freshwater streams and ponds through recreational activities such as fishing and 
swimming.  For citizens of Waterford, including Quaker Hill, and New London, the 
freshwater resources in the watershed provide drinking water to 13,000 homes and 
businesses.   
   
According to Min Huang, CT DEP Migratory Game Bird Program Leader, the Niantic 
River harbors relatively large concentrations of resident mallards, Canada geese, and 
feral mute swans throughout the year.  The largest concentrations of resident waterfowl 
are typically found in the upper reaches of the river.  These birds will stay in the upper 
reaches of the river until ice forces them further downstream.  In the fall, winter, and 
early spring the lower river holds large numbers of wintering diving ducks such as 
hooded mergansers, bufflehead, and red-breasted mergansers.  The bay, south of RT 156, 
attracts large flocks of Atlantic brant and, to a lesser extent, common goldeneye during 
the winter months. 
 
The shallow marine estuary of the Niantic River was formed when sea level was at an 
elevation high enough to flood the low lying coastal valley. The river has historically 
supported healthy populations of shellfish, crustaceans, and finfishes and also provides 
excellent bird habitat as ospreys, herons, kingfishers, and cormorants may be observed at 
various times throughout the year.  A fish ladder installed in Latimer Brook just north of 
I-95, allows the passage of species such as alewives and sea-run trout to spawning areas 
upstream.  
 
In East Lyme, the area known as Oswegatchie Hills consists of over 700 acres of valuable 
land that offers great recreational potential because of its interesting terrain, and diverse 
wildlife. It is also one of the last large stretches of undeveloped waterfront land in 
Connecticut. The Waterford shoreline along this reach consists mainly of sandy beaches 
and gradual wooded slopes with moderate density residential development.  
 
For additional information on Niantic River resources please refer to Section 3 of the 
full Niantic River Watershed Protection Plan. 
 

 
9
 
Figure I - Niantic River Watershed 

 
10
The Niantic River 
does not currently 
meet state water 
quality standards 
because of 
observed 
degradation of 
aquatic life 
Water Quality Issues in the Watershed 
 
The Niantic River does not currently meet state water quality standards because of 
observed degradation of aquatic life.  A map of the water quality classifications for the 
watershed based on 2006 data is shown on the following map (Fig. 
II).  Table I describes the surface water quality classifications. 
 
There are two active shellfish beds in the Niantic River.  The upper 
bed remains open year round, while the lower bed is closed during 
boating season.  Following one inch of rainfall, the State of 
Connecticut, Department of Aquaculture, is required to close both of 
the shellfish beds, regardless of the time of year. Rain carries 
bacteria into the river where it is filtered by shellfish rendering them unsafe for 
consumption. Normally it would take 14 to 28 days for shellfish to cleanse themselves 
(depurate) so that potentially harmful bacteria are no longer a concern (until the next 
1”rainstorm).   
 
 The §303(d) List of Impaired Waters states that the water quality of the Niantic River is 
not supporting the aquatic life known to inhabit the estuary. Symptoms of this condition 
include, algal blooms, seasonal variations in eelgrass populations, loss of scallop 
populations and changes to the fish communities.  
Table I Surface Water Quality Classifications for the Niantic River and its Tributaries  
 
Populations of marine plants and animals commonly found in the Niantic River have 
decreased over the past 4 decades (Millstone Environmental Laboratory (MEL), 2005). 
Beginning in the 1980s, a sharp decline in eelgrass (Zostera marina) was documented 
(Marshall, 1994) and in more recent years, eelgrass in the Niantic has shown annual  
Class 
Comment 
Use 1 
Use 2 
Use 3 
Use 4 
Use 5 
A 
Known, or 
presumed, to 
meet criteria 
which support 
designated 
uses 
Potential 
drinking 
water supply 
Fish and 
wildlife 
habitat 
Recreational 
use 
Agricultural 
or industrial 
supply 
Other 
legitimate 
uses including 
navigation 
AA 
Known, or 
presumed, to 
meet criteria 
which support 
designated 
uses 
Existing or 
proposed 
drinking 
water supply 
Fish and 
wildlife 
habitat 
Recreational 
use (may be 
restricted) 
Agricultural 
or industrial 
supply 
Other 
legitimate 
uses including 
navigation 
SA 
Uniformly 
excellent 
Direct 
consumption 
of shellfish 
Designated 
swimming 
All other 
recreational 
uses 
 
 
SB/SA 
Currently not 
meeting 
criteria for SA 
target 
Shellfish for 
processing 
prior to 
consumption 
Fish, 
shellfish, and 
wildlife 
habitat 
Recreational 
use 
Industrial 
Other 
legitimate 
uses including 
navigation 

 
11
 
Figure II – Surface Water Quality Classification 

 
12
This widespread, 
nonpoint source 
pollution is the 
greatest threat to 
the water quality 
and ecological 
health of the 
Niantic River.
Without the continued 
maintenance of existing 
water quality conditions, 
or attempts to reduce 
nonpoint source inputs, 
the health of the Niantic 
River ecosystem will 
deteriorate further.
variation (MEL, 2005). Continued threats to eelgrass populations in the Niantic River 
include nutrient input from domestic septic systems, disease, increased turbidity, 
competitive interactions with macroalgae, and herbivory.  Scallops and winter flounder 
rely on eelgrass as nursery habitat and are practically missing from the Niantic River 
(Heck, et al., 1995; MEL, 2005).  Meanwhile, new species like green crabs and grubby, 
appear to be on the rise in the River (MEL, 2005).  
 
The cause of this impairment to aquatic life is not completely understood; however, there 
is a building body of scientific evidence that states that the river is overloaded with 
nutrients, primarily nitrogen. Nitrogen enriches the brackish Niantic 
River water, like fertilizer on a lawn, increasing algal and plant 
growth. Like bacteria, nutrients flow to the river with stormwater 
and are considered a problem of nonpoint source pollution. 
 
Bacteria and nitrogen enter the Niantic River from several sources. 
Historically, marine vessels, inadequately functioning septic systems 
and stormwater runoff have been cited as the primary sources of 
these and other pollutants to the Niantic River. Table II lists 
nonpoint sources of pollutants their characteristics and impacts.  Polluted runoff, illegal 
marine discharges and sewer line accidents are the most probable sources of bacteria to 
the Niantic (CT DA/BA, 2005).  
 
Nitrogen associated with polluted runoff, atmospheric deposition and groundwater inputs 
are critical water quality concerns for the Niantic River (Marshall, 1994; Mullaney, 2006; 
Stacey and Mullaney, 2004). For instance, we know that polluted runoff accounts for 
approximately half (50%) of the nitrogen inputs into the Niantic River. Atmospheric 
deposition of nitrogen accounts for approximately 10% of the nitrogen making its way to 
the river (Marine Biological Laboratory, 2006). The remaining nitrogen is most likely 
coming from sources such as septic systems and fertilizer, through groundwater discharge 
(Mullaney, 2006). 
 
As East Lyme and Waterford continue to extend domestic wastewater sewers to homes 
along the river, Salem and Montville enforce their surface water protection areas and 
marine vessels are prohibited from dumping sanitary wastewater into the river, 
stormwater runoff has become the primary target for protecting the Niantic River.   
Stormwater runoff transports pollutants of the land into the many drainage systems and 
tributaries feeding the Niantic River.  This widespread, nonpoint source pollution is the 
greatest threat to the water quality and ecological health of the 
Niantic River. 
 
In recent times, changes in river ecology believed to be 
associated with nitrogen loading include the loss of 
commercially important shellfish species, in addition to eelgrass 
stands and indicate a need for further water quality protection. 
Measures to protect water quality include land use and 
development controls to help reduce the influx of nonpoint source pollution. 
Additionally, the designation of the river and near-shore waters of Long Island Sound as 

 
13
a No Discharge Area may help eliminate potential sewage discharges from vessels, and 
eliminate another source of nutrient enrichment (CTDEP, 2005). Without the continued 
maintenance of existing water quality conditions, or attempts to reduce nonpoint source 
inputs, the health of the Niantic River ecosystem will deteriorate further. 
 
Table II - Nonpoint Source Pollutants, Characteristics and Impacts 
Nonpoint 
Source 
Pollutants 
 
Pollution Characteristics 
 
Impacts 
 
Short term: increased 
turbidity, reduced light 
penetration, decreased 
submerged aquatic vegetation 
(SAV), respiration impacts to 
fish and wildlife, reduced 
fecundity in fish. 
Sediments 
 
• Produced by natural and anthropogenic erosion of 
 streams. 
• Generated by particulates settled on impervious 
surfaces. 
• Constitutes the largest mass of pollutant loadings to 
surface waters. 
• Provide transport for other pollutants like nutrients and 
bacteria. 
 
Long term: Smothered 
benthic 
habitat, siltation, channel 
shoaling, 
aesthetic impacts.   
Nutrients 
 
• Introduced to the watershed by the burning of fossil 
fuels, use of fertilizers and detergents and the 
deposit/disposal of human and animal wastes. 
• Phosphorus and nitrogen are the primary nutrients of 
concern.  
• Eutrophication and low 
dissolved oxygen in marine 
ecosystems. 
 
Oxygen- 
Demanding 
Substances 
 
• Organic matter enters fresh and coastal waters and then 
is decomposed, depleting dissolved oxygen. 
• Organic matter is washed off impervious surfaces with 
runoff.   
• Depletes dissolved oxygen. 
• Exacerbates the negative 
impacts of eutrophication. 
 
Pathogens 
 
• Associated with the feces of warm-blooded animals. 
• Elevated levels typically found in urban runoff. 
• Leading cause of water quality impairments in the 
United States.   
• Beach and shellfish bed 
closures. 
• Contaminated drinking 
water sources.   
Road Salts 
 
• Primarily in northern climates. 
• Major pollutant in urban areas. 
• Produces high salt/chlorine concentrations in surface 
and ground water. 
 
• Contaminated surface 
waters and ground water. 
• Toxic to benthic organisms. 
• Ecological effects 
pronounced in freshwater 
systems.   
Petroleum 
hydrocarbons 
 
 
• Derived from oil and other petroleum products. 
• Introduced into the watershed from vehicles. 
• Accumulates on impervious surfaces. 
• Bind to sediments and often collect in the benthic 
region. 
• Toxic to aquatic life at high 
and low levels depending on 
compound. 
• Accumulate and persist in 
the benthic environment.  
Heavy Metals 
 
• Common in urban runoff: cadmium, chromium, copper, 
lead, and zinc. 
• Copper, lead, and zinc are the most prevalent in 
nonpoint source pollution from urban areas. 
• Deposit from vehicles and the atmosphere (particulate 
matter).  
• Produce toxic effects on 
aquatic life. 
• Bioaccumulate in fish and 
marine mammals. 
 
Toxics 
• Various toxic compounds (USEPA “priority 
pollutants”) can be found in urban runoff.   
• Acute and chronic impacts 
to aquatic life.  

 
14
It is the 
cumulative 
impacts of years 
of development 
with which we are 
concerned. 
 
Table III - Area in Acres of Land Cover Type  
Description 
Change in Acres
1985 
2006 
Developed 
+653.3 
1969.1 
2622.4 
Turf and Grass* 
+274 
607.0 
881.0 
Other Grasses 
+104.6 
264.5 
369.1 
Agricultural Fields 
-109.5 
758.0 
648.5 
Deciduous Forest 
-984.3 
12245.8
11261.5 
Coniferous Forest 
-38.5 
905.8 
867.3 
Water 
-77.6 
1536.9 
1459.3 
Non-forested Wetland
+1.1 
63.3 
64.4 
Forested Wetland 
-63.6 
938.4 
874.9 
Tidal Wetland 
0 
0.3 
0.3 
Barren 
+248.2 
338.5 
586.7 
Utility Corridors 
-7.6 
129.5 
121.9 
Totals 
 
19757.3
19757.3 
(*includes golf course greens) 
Satellite Derived Land Cover data version 2.02, J. Stocker, UCONN, 10/03/08 
For additional information on Water Quality concerns please refer to section 4.0 of the 
full Niantic River Watershed Plan – Bacteria (4.2.1), Nitrogen Loading (4.2.2), Niantic 
River Ecosystem (4.3), and Fish Community and Macroinvertebrates (4.4) 
 
Land-Use and Water Quality   
 
The Niantic River Watershed exhibits a settlement pattern similar to other coastal 
watersheds in the Northeast United States. Older, denser development occurred along the 
coast in association with shipping and commercial centers while forestry and agriculture 
were the predominant land uses inland (Marshall, 1994 and Civco, et. al., 2002). This 
land use pattern continues, by and large, with the exception that the upper portions of the 
watershed have converted back to forest land now that agricultural uses have diminished 
or are being developed for residential or commercial uses as a result of sprawl from the 
coastal areas. In the lower portions of the watershed – East Lyme and Waterford – new 
development is restricted to infill areas with the exception of 
Oswegatchie Hills in East Lyme. In the upper reaches of the 
watershed - Montville and Salem – there remain sizeable areas of 
land that could be developed. 
 
Figures III and IV on the following pages, illustrate the land cover 
changes in the Niantic River Watershed between 1985 and 2006.  
Table III below gives the acreages per land use cover for 1985 to 2006.  This 
characteristic of land use change is probable cause for nonpoint source pollution and 
related water quality problems.   Note that there has been significant increase in 
developed land and a substantial decrease in forest land acres. 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Generally, no one development will cause, in and of itself, the degradation of a stream. It 
is the cumulative impacts of years of development with which we are concerned. 
Development in the Niantic River Watershed has occurred and will occur incrementally 

 
15
Impervious surfaces 
not only increase the 
total volume of runoff, 
but also transmit 
pollutants readily and 
can even contribute to 
thermal pollution. 
over time. From year to year, changes in the landscape, as a result of development, are 
negligible with the possible exception of relatively large developments (e.g. “big box” 
retail outlets, large residential, or road projects) on large parcels of land. But, after many 
years, landscape changes are obvious. The same holds true for nonpoint source pollution; 
the gradual development of the watershed will cause water quality concerns over time 
unless protective actions are taken. 
 
Civco and others (2002) have described land use as, “the common denominator 
underlying many of the issues that our communities face from nonpoint source water 
pollution and open space preservation to sustainable economic 
development and community character”. Changes in land use are 
the result of community decision-making with regard to all of 
these community objectives. Development converts vegetated 
land to mostly impervious surfaces. When the pattern of 
development emanates from urban areas to suburban and rural 
areas, we call this pattern ‘urban sprawl’. Therefore, as 
settlement expands into rural areas, building and road density 
increases in these areas increasing the area of impervious surfaces. 
 
The area of impervious surfaces in a watershed is essential to understanding nonpoint 
source pollution potential and consequent management requirements (Schueler, 1994; 
Sleavin et al., 2000).  Impervious surfaces include any surface that water cannot 
infiltrate, such as parking lots, paved roads, sidewalks, buildings, rooftops, and highly 
compacted earth. Impervious surfaces not only increase the total volume of runoff, but 
also transmit pollutants readily and can even contribute to thermal pollution. Therefore, 
much of the impervious surface we recognize in our community is associated with 
transportation or buildings. Schueler (1994) noted that the transportation system typically 
contributes the most to total impervious area in a watershed.    
 
 

 
16
 
Figure III – Land Use Cover - 1985 

 
17
 
Figure IV - Land-Use Cover-2006 
 
 
 

 
18
As a watershed’s 
imperviousness 
increases, the 
quality of its 
streams 
decreases. 
 
Impervious surfaces lead to four major impacts to a watershed. In no 
particular order, these are altering the natural flow of water, aquatic 
habitat loss, decreasing water quality, and loss of biological 
diversity. As a watershed’s imperviousness increases, the quality of 
its streams decreases. Early and recent work by the Center for 
Watershed Protection (CWP) in the Chesapeake Bay Watershed 
established a close relationship between a watershed’s 
imperviousness and the state of water and habitat quality degradation in streams (CWP, 
2003). Figure V illustrates this relationship and reflects the degree of stream degradation 
as degraded, impacted, and protected.  
 
(adapted from UCONN NEMO, 2006 and Schueler, 2002) 
 
Figure V – Relationship between Watershed Imperviousness and Stream Degradation  
 
Full build-out scenarios were developed for each of the sub-basins in the watershed to 
predict the amount of impervious surface coverage based on current zoning.  Impervious 
surface percents were calculated for current conditions and were estimated under full-
buildout conditions.  Basins at less than 10% impervious are shaded green, between 10 
and 25% impervious are shaded yellow and above 25% impervious are shaded red. Maps 
of estimated current and future percent impervious surface area for basins are shown on 
Figures VI and VII. 
 
Based on existing conditions approximately 90% of the sub-basins in the Niantic River 
Watershed have less than 10% impervious surface coverage.  The remaining 10% falls 
between the 10-25% range.  Under the projected build-out analysis approximately 69% of 
the of sub-basins will have less than 10% impervious coverage, 29% would then be in the 
10-25% range and 2% of the sub-basins would have impervious surface coverage over 
25%.  Referring to the graph above, this would mean that based on current land 
development practices over 30% of the sub-basins will fall into the impacted or degraded 
category. 
 
For additional information on Land-Use in the Niantic River resources please refer to 
sections 4.5 of the full Niantic River Watershed Plan. 
 

 
19
 
Figure VI – Estimated Current Impervious Area per Basin 

 
20
 
Figure VII – Estimated Current Impervious Area per Basin at Buildout 

 
21
The nature of 
nonpoint 
source 
pollution makes 
it extremely 
challenging to 
manage. 
…watershed 
boundaries 
are not 
political 
boundaries 
Watershed 
management 
boils down to 
land use 
management. 
…there is real hope 
and possibility to 
prevent further 
degradation of the 
Niantic River and to 
restore it to an 
improved condition 
What Needs to be Done? 
 
Significant investments have been made to control pollution to the Niantic River. 
East Lyme and Waterford have sewered many of the neighborhoods along the shores of 
the river to eliminate the risk of bacterial and nutrient pollution from 
septic systems. The Niantic boating community is being encouraged to 
observe the No Discharge Zone on the river to control sewage from 
marine vessels. These efforts, combined with advances in stormwater 
management, offer hope that impacts from historic activities can be 
turned around. However, the impacts and management of nonpoint 
source pollution (i.e. polluted runoff and stormwater) remain. 
 
The nature of nonpoint source pollution makes it extremely challenging to manage. It is 
decentralized (sources vary and are scattered), cumulative (pollution results not from one, 
voluminous event; rather, it occurs over time in regular, periodic 
rain/runoff events), and systematic (an entire hydrologic unit 
[watershed] is both the scope and scale of the problem). In the case of 
the Niantic River, pollution is transported to the main stem via several 
smaller streams, each carrying pollutant loads emanating from sources 
somewhere else in the watershed. Hence, effectively managing nonpoint 
source pollution issues relies on an approach that is comprehensive and 
watershed-based, i.e. scaled according to the natural system to be managed. 
 
Although watershed-based management plans have been recognized as the approach to 
dealing with nonpoint source pollution, they are not without their own set of challenges. 
For instance, watershed boundaries are not political boundaries; therefore several 
jurisdictions often have a stake in watershed management. The Niantic River Watershed 
includes portions of four towns – East Lyme, Montville, Salem, and 
Waterford. Therefore, watershed management relies on participation and 
execution from all four communities. 
 
Watershed management boils down to land use management. By and 
large, land use planning and regulation, including the management of runoff (i.e. 
stormwater), lies with the municipalities. Current nonpoint source pollution problems are 
linked to historic development and stormwater management in these four communities. 
Like all coastal watershed communities in Connecticut, population and development 
pressure will continue to yield more full-time residents, housing and other developments, 
thereby increasing the potential for nonpoint source pollution problems. (NOAA, Spatial 
Trends in Coastal Socioeconomics (STICS), 2006). 
 
As the last remaining parcels of developable land are converted to 
commercial, industrial, and residential uses, the quantity and quality 
of stormwater runoff can be expected to change. Therefore, it is 
central to this plan that polluted runoff be considered the greatest 
water quality management challenge for the Niantic River, primarily 
because it is considered the most manageable of all potential sources of pollution to the 

 
22
river. That is to say there is real hope and possibility to prevent further degradation of the 
Niantic River and to restore it to an improved condition. This plan is needed to establish a 
coherent and practical approach to dealing with nonpoint source pollution in the Niantic 
River Watershed. 
 
Key Watershed Findings 
 
In completion of the full Niantic River Watershed Plan, several key project findings 
emerged which spearheaded the recommendations for future management efforts in the 
watershed.   Table IV on the following page summarizes those findings. 
 
Watershed Stakeholders—Where Do You Fit In? 
 
There are four categories of watershed plan stakeholders. The categories are defined by 
the role the stakeholders play in moving the plan forward. In Table V the stakeholder 
roles are defined by the questions listed in the left column and the stakeholders in the 
right column. Many of these stakeholders were involved in the planning process and all 
play a role in plan implementation. 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

 
23
Table IV – Key Watershed Findings 
Data Assembly & Results 
 
• 
Fifteen or more storm sewer outfalls discharge untreated runoff 
directly into the Niantic River. These outfalls collect runoff from 
several drainage areas of various sizes along the Niantic River 
shoreline. 
• 
As a watershed’s imperviousness increases, the quality of its 
streams decreases – a relationship well-established in scientific 
literature. Five drainages of the Niantic River are currently 
covered by over 10% impervious surfaces such as roads, parking 
lots, sidewalks and roofs. At fully developed conditions 
(maximum development allowed by current planning and zoning 
regulations), ten drainages in the watershed will be covered by 
10% or more imperviousness and one drainage will be over 30% 
impervious surface cover. 
• 
Stormwater modeling showed increased loading to the Niantic 
River from existing development, but drainages adjacent to the 
lower river are fairly developed with respect to the remainder of 
the watershed. Any areas that may be considered developable 
pose a risk for direct discharge to the lower river by increasing 
the pollutant loading through its tributaries. 
• 
Undeveloped areas further upstream in the watershed pose a great 
risk to increasing loads to town water supply reservoirs. 
Preservation of lands abutting receiving waterbodies is as much a 
key component to water quality protection as is stabilizing and 
treating existing development. 
• 
Tracked development of the watershed has steadily increased 
since monitoring using aerial images was implemented in 1985. 
Since that time, over a thousand acres of forest has been 
converted into either developed, barren or grassed lands. 
Zoning 
 
• 
Each of the towns is making great efforts to do their part in 
protecting the waters of their communities. A more effective 
approach may be to match wetland protection requirements for a 
consistent watershed wide approach to protecting water quality. 
For example, the towns of East Lyme and Waterford each have a 
100-foot upland review for wetlands and watercourses, where the 
towns of Montville and Salem have different buffer areas. 
Environmental 
 
• 
Eelgrass populations plummeted in 1999, but experienced a 
rebound in 2003 and 2004. The future of the grass is still 
questionable and requires regular protection and monitoring. It is 
believed that continued growth of the eelgrass populations will 
also aid in restoring shellfish populations, although the increased 
predation by an overall increase in fish species may limit growth 
opportunities.  
• Monitoring 
 
• 
Measurement of water quality throughout the watershed is not 
currently a standard practice. Improvements may be made 
through BMP and planning changes, but without practical 
measurement techniques, it becomes difficult to measure, monitor 
and adjust. 
• 
Monitoring and inspection programs, which are making great 
progress, are underway in the Towns of Waterford and East 
Lyme, but the potential for future development is the greatest in 
the upper reaches of the watershed. 
 
 

 
24
Table V – Stakeholder Roles 
Who is responsible for implementing 
the plan? 
Property Owners and Managers (e.g. Home & Business) 
Developers, contractors and realtors 
Local government: 
• 
Local boards and commissions 
• 
Directors of Department of Public Works – East Lyme, 
Montville, Salem, Waterford 
• 
Directors of Planning – East Lyme, Montville, Salem, 
Waterford 
• 
Environmental Planner/Wetland Officer – East Lyme, 
Montville, Salem, Waterford 
• 
Zoning Officers 
• 
East Lyme-Waterford Shellfish Commission 
• 
Niantic River Gateway Commission 
• 
Ledge Light Health District 
State agencies: 
• 
CTDEP Bureau of Water Protection and Land Reuse – 
OLISP, Nonpoint Source Pollution Program, Coastal 
Management 
• 
CTDEP Bureau of Natural Resources – Fisheries, 
Wildlife 
• 
Connecticut Department of Transportation (ConnDOT) 
• 
Connecticut Department of Health 
Local environmental groups 
• 
Save the River, Save the Hills & Friends of 
Oswegatchie Hills 
Who is affected by the implementation 
of the plan? 
Property owners, Water supply 
customers, Local businesses, 
Visitors 
Recreational users,  
Boaters, Marinas, Anglers 
Who can provide information on the 
issues and concerns in the watershed? 
Property owners 
Anglers  
Boaters  
Local government:  
• 
Boards of Selectman, planning, zoning, wetland 
commissions in East Lyme, Montville, Salem, 
Waterford. East Lyme-Waterford Shellfish Commission 
State agencies:  
• 
CT Department of Agriculture/Bureau of Aquaculture, 
CTDEP Bureaus of Natural Resources & Outdoor 
Recreation, Office of the Commissioner 
Non-profit organizations 
Who can provide technical and 
financial assistance in developing and 
implementing the plan? 
State agencies and institutions:  
• 
CTDEP Bureau of Water Protection and Land Reuse – 
OLISP, Nonpoint Source Pollution Program, Coastal 
Management  
• 
CTDEP Bureau of Natural Resources – Fisheries, 
Wildlife •ConnDOT  
• 
CT Department of Agriculture/Bureau of Aquaculture,  
(DA/BA)  
• 
University of Connecticut Cooperative Extension 
System 
Federal agencies:  
•
NOAA, USEPA, USGS, USDA NRCS, USFWS 
 
 

 
25
Goals and Objectives  
 
Overarching Goal  
 
To restore and preserve the Niantic River and its tributaries so that they fully 
support all uses, including shellfishing, fishing, swimming and habitat for aquatic-
life. 
 
Main Goals and Objectives 
 
Support Designated Uses for Shellfishing and Primary Contact 
Recreation  
• Reduce bacterial loads from stormwater outfalls, runoff and direct 
discharges 
 
 
Support Designated Uses for Aquatic Life  
• Reduce nutrient loading from stormwater outfalls and runoff 
 
 
Protect and Restore Natural Stream Channels 
• Minimize flooding impacts by improving peak and volume controls 
from impervious surfaces 
• Preserve and restore critical wetland and watercourse vegetative 
buffers 
 
Raise Stakeholder Awareness and Involvement by Implementing a 
Watershed Management Information and Education Campaign 
• Educate stakeholders about the Niantic River and its tributaries and 
watershed management. 
 
Establish a Sustainable Coalition of Partners to Manage the Niantic River 
Watershed 
• Create a coalition of watershed stakeholders to take a leadership role 
for the implementation of this plan 
 
Improve Water Quality and Biological Monitoring for the Niantic River 
and its Tributaries 
• Establish a comprehensive long-term water quality monitoring 
program for the Niantic River Watershed 
 
 
 
 
 
 
 
 

 
26
Key Recommendations 
 
The following recommendations were adopted from the full version of the Niantic 
River Watershed Protection Plan.  They have been organized to present an edited 
version of the original recommendations to facilitate implementation.     
 
 
Establish a Watershed Coalition 
• Support establishment of a sustainable watershed board 
1. The coalition, which may be formed by modifying an existing 
board, would include appointed representatives from each of 
the four towns.  This may include town officials, town board 
members, local environmental and non-profit organizations, 
business owners and landowners. Liaison representation from; 
environmental organizations with an interest in the watershed, 
local, state, and federal government, utilities, educational 
institutions and local businesses should be encouraged. 
2. Responsibilities would include putting into action the 
recommendations of the watershed management plan, with 
periodic plan reviews and updates.   
 
 
Continued Support for a Watershed Coordinator Position 
• Support a Watershed Coordinator Position 
1. This position would be dedicated to assisting the watershed 
board in implementing the Watershed Management Plan 
including conducting the inter-jurisdictional coordination 
activities, grant-writing and evaluation of plan achievements. 
 
Develop and Implement Education and Outreach Programs 
• Increase stakeholder awareness about the link between shellfish 
closures and sources of bacterial pollution in the Niantic River. 
• Increase stakeholders’ level of knowledge about nutrient loading 
and the health of the Niantic River Estuary. 
• Educate land use decision makers about the value of vegetated 
riparian buffers in the protection of water quality.  
• Establish an outreach and tracking program for landowners about 
on-site septic system maintenance. 
• Partner with other local groups to develop and implement a 
comprehensive education and outreach program addressing water 
quality and watershed management issues 
1. Identify existing programs and target audiences 
2. Develop targeted outreach activities and materials- See Table 
VI on following page.( and Chapter 7 of the full plan) 
3. Annual evaluations on program(s) effectiveness  
4. Include public updates on municipal participation, local 
business efforts, development changes, monitoring results, 
changing technology and open space preservation. 

 
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Table VI – Outreach Activities 
Targeted Group 
Outreach Activities 
Marinas and boat owners 
9 Support incentive and recognition programs for 
marinas to become Certified Connecticut Clean 
Marinas 
9 Support and assist in boat owner education programs 
9 Support pump out program conducted by Save the 
River-Save the Hills and improve awareness of 
availability land based pumpout facilities at Niantic 
Dockominiums, Three Belles, and Port Niantic in 
addition to the dump station at Niantic Bay Marina.  
Homeowners and 
business owners 
9 Periodically complete a public outreach campaign for 
shoreline neighborhoods about potential sources of 
bacterial pollutants 
9 Conduct ongoing outreach on topics such as lawn 
care practices, pet waste management, and 
impervious surface run-off.  Support MS4 
requirements wherever feasible. 
9 Encourage and participate in programs such as storm 
drain stenciling, river and beach clean-ups and 
household hazardous waste disposal 
9 Promote the protection of riparian buffers for the 
benefit of water quality and habitat protection.  
Encourage public participation in habitat restoration 
and riparian revegetation projects 
9 Promote good “housekeeping” practices  
Contractors and 
developers 
9 Sponsor on-going workshops to promote topics such 
as management of  nitrogen loading during the 
development process, best management practices 
during construction 
Municipal staff and 
appointed and elected 
officials 
9 Partner with organizations such as CT-NEMO, 
NRCS and CT Sea Grant to provide ongoing 
education on topics including; LID practices, riparian 
buffers, land conservation, stormwater regulations, 
housekeeping BMPs and management of nitrogen 
loading during the development process 
 
Local Schools and youth 
organizations 
9 Work with local schools, education facilities and 
youth groups to promote outreach opportunities on 
water quality programs 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

 
28
What does it mean? 
LID- design strategy using small 
scale controls integrated 
throughout a site to manage 
stormwater run-off and replicate 
pre-development hydrology 
BMP-a measure used to mitigate 
changes to the quality and 
quantity of runoff due to 
development 
Cluster Subdivisions-subdivisions 
that promote the preservation of 
natural resources while allowing 
similar densities as a 
conventional subdivision. 
Develop Design Standards for Local Implementation 
• Mitigate the impacts of increased/increasing impervious surfaces 
from development through Low Impact Development (LID) design 
and Best Management Practice 
(BMP) implementation.  Apply to 
new and redeveloped sites, both 
public and private. 
1. Incorporate low-impact site 
preparation and development 
techniques. 
2. Wherever feasible, eliminate 
curb requirements and 
mandatory sidewalks, reduce 
road widths and require 
pervious surfaces. 
3. Adopt new or modify existing 
cluster and/or conservation 
subdivision ordinances that promote density allowances with 
minimum footprints and limit rezoning that will result in more 
impervious surface and/or less wetlands in critical sub-drainage 
basins. 
4. Encourage and enforce non-structural, non-piped stormwater 
handling techniques wherever possible, avoid short-circuiting 
of stormwater discharges and incorporate effective vegetative 
buffers in site design. 
5. Carefully consider any rezoning that would allows an increase 
or high percentage of impervious surface on a lot.   
• Encourage and support municipal approaches to land-use 
planning, development reviews and site inspections that protect 
watershed resources.   For uniformity within the watershed, the 
following management tools should be considered in land-use 
regulations and review of development proposals.   
1. Conduct assessments of tributaries to establish stream 
preservation and restoration priority locations and needs.  
Assess value and functions of resources, (i.e. wetland and 
watercourses) as part of preliminary planning and design.   
2. Use an Upland Review Area from inland wetlands and 
watercourses boundaries in Inland Wetland and Watercourse 
Regulations.  The DEP and Niantic River Watershed Protection 
Plan recommended guideline is 100 feet. 
3. Regulate activities in any other non-wetland or non-
watercourse area that will likely impact inland wetland or 
watercourses.  
4. A minimum 50 foot wide vegetated buffer beyond wetland and 
watercourse boundaries, within which no alteration or 
vegetative removal is permitted, to the extent feasible.  

 
29
What does it mean? 
2004 CT Stormwater 
Manual-Standards adopted 
by the State of CT to 
address stormwater control 
design and maintenance 
2002 Guidelines for 
Sediment & Erosion 
Control-Standards adopted 
by the State of CT to 
address soil erosion and 
site stabilization 
Encourage vegetative buffer restoration where needed. 
5. A riparian buffer overlay zoning district based on delineation 
of perennial and associated wetlands with associated widths of 
100 feet for larger streams and 50 feet for smaller, headwater 
streams.   
6. Protect existing wetlands, vernal pools and watercourses to 
maximum extent practicable (i.e. no alteration of areas with 
good existing functions and values).  Mitigate for any and all 
wetland/riparian impacts, with emphasis on re-establishing 
vegetated buffers (water quality filtration zones) in 
appropriately placed locations (even if uplands locations are 
the only option)  
7. Focus on stormwater treatment at beginning of site design.  
Design stormwater management treatment and controls that can 
and will be maintained, are suited to the site,  maximize 
pollutant removal and minimize flooding impacts.  Consider 
soils, hydrology, peak flows, stormwater volume, wetland and 
watercourse values and function, 
receiving waters, topography and 
vegetation.  Develop checklists for 
stormwater design and, construction 
inspection and long-term 
maintenance.  Table VII below lists 
management objectives and targets 
for bacteria, nitrogen and peak 
stormwater volume controls. 
8. Use resources including 2004 
Connecticut Stormwater Quality 
Manual, 2002 Guidelines for 
Sediment and Erosion Control, and full version of the Niantic 
River Watershed Protection Plan for plan and site reviews. 
9. Apply development restrictions on steep slopes or adopt a steep 
slope overlay zone.   
10. Develop incentive based programs where appropriate to 
promote resource protection.   
 
 
 
 
 
 
 
 
 
 
 

 
30